Journal papers
- S. Roman, A. Merlo, P. Duru, F.Risso and S. Lorthois. Going below 20 µm-sized channels for studying red blood cell phase separation in microfluidic bifurcations. Biomicrofluidics 2016 : 034103 (23p.), http://dx.doi.org/10.1063/1.4948955.
- PM. Rasmussen , AF. Smith , S. Sakadžić , DA. Boas , AR. Pries , T. W. Secomb , L. Østergaard. Model based inference from microvascular measurements: Combining experimental measurements and model predictions using a Bayesian probabilistic approach. Microcirculation 2017 : 24, e12343, https://doi.org/10.1111/micc.12343.
- M. Peyrounette, Y. Davit, M. Quintard and S. Lorthois. Multiscale modelling of blood flow in cerebral microcirculation: Details at capillary scale control accuracy at the level of the cortex. PLOS ONE 2018 : 13, e0189474 (35p). https://doi.org/10.1371/journal.pone.0189474
- JC. Cruz Hernández, O. Bracko, CJ. Kersbergen, V. Muse, M. Haft-Javaherian, M. Berg, L. Park, LK. Vinarcsik, I. Ivasyk, Y. Kang, M. Cortes-Canteli, M. Peyrounette, V.Doyeux, A. Smith, J. Zhou, G. Otte, JD. Beverly, E. Davenport, Y. Davit, S. Strickland, C. Iadecola, S. Lorthois, N. Nishimura, and CB. Schaffer. Neutrophil adhesion in brain capillaries reduces cortical blood flow and impairs memory function in Alzheimer’s disease mouse models. Nature Neuroscience 2019 : 22, 413–420. https://doi.org/10.1038/s41593-018-0329-4.
- M. Haft-Javaherian , L. Fang , V. Muse , CB. Schaffer , N. Nishimura , MR. Sabuncu. Deep convolutional neural networks for segmenting 3D in vivo multiphoton images of vasculature in Alzheimer disease mouse models. PLOS ONE 2019 https://doi.org/10.1371/journal.pone.0213539
- A F. Smith, V. Doyeux, M. Berg, M. Peyrounette, M. Haft Javaherian, A.E. Larue, J.H. Slater, F. Lauwers, P. Blinder, D. Kleinfeld, C.B. Schaffer, N. Nishimura, Y. Davit and S. Lorthois. Brain capillary networks across species: a few simple organizational requirements are sufficient to reproduce both structure and function. Frontiers in Physiology 2019. https://doi.org/10.3389/fphys.2019.00233.
Preprints
- JC. Cruz Hernández, O. Bracko, CJ. Kersbergen, V. Muse, M. Haft-Javaherian, M. Berg, L. Park, LK. Vinarcsik, I. Ivasyk, Y. Kang, M. Cortes-Canteli, M. Peyrounette, V.Doyeux, A. Smith, J. Zhou, G. Otte, JD. Beverly, E. Davenport, Y. Davit, S. Strickland, C. Iadecola, S. Lorthois, N. Nishimura, and CB. Schaffer. Capillary occlusions reduce cortical blood flow and impair memory in Alzheimer’s mouse models. BioRXiv 2017, DOI:10.1101/226886.
International Conferences
- N. Nishimura, C. Kersbergen, J. Cruz Hernandez, I. Ivasyk, Y. Kang, S. Gherking, V. Muse, J. Zhou, J. D. Beverly, G. Otte, T. P. Santisakultarm, E. Slack, C. Iadecola, C.B. Schaffer, Stalled capillary flow is a novel mechanism for hypoperfusion in Alzheimer’s disease, 2014 Neuroscience Meeting, Washington, DC, Novembre 2014.
- M. Peyrounette, S. Lorthois, Y. Davit, M. Quintard, A mixed approach for modeling blood flow in brain microcirculation. AGU Fall Meeting, San Francisco, December 2014.
- S. Lorthois, M. Peyrounette, Y. Davit, M. Quintard, A mixed approach for modeling blood Flow in brain microcirculation. 68th Annual Meeting of the APS Division of Fluid Dynamics, Boston, Nov 2015.
- S. Lorthois, M. Peyrounette, E. Larue, T. Le Borgne, Flow distributions and spatial correlations in human brain capillary networks. 68th Annual Meeting of the APS Division of Fluid Dynamics, Boston, Nov 2015.
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A. Smith, A.E. Larue, M. Peyrounette, S. Lorthois. Structural and hemodynamic comparison of synthetic and anatomical cerebral capillary networks, 22nd Congress of the European Society of Biomechanics, Lyon, Juillet 2016.
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V. Doyeux, Y. Davit, S. Lorthois, A numerical framework for the simulation of molecular diffusion in the micro-vascular system, 22nd Congress of the European Society of Biomechanics, Lyon, Juillet 2016.
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A. Merlo, P. Duru, S. Lorthois. Study of the phase separation effect in capillary-size micro-channels, 5th Micro and Nano Flows Conference, Milan, Septembre 2016.
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M. Haft Javaherian, V. Muse, J. C. Cruz Hernández, C. Kersbergen, I. Ivasyk, Y. Kang, G. Otte, S. Lorthois, C. B. Schaffer, N. Nishimura. Comparison of brain vasculature network characteristics between wild type and Alzheimer’s disease mice using topological metrics, 2016 Neuroscience Meeting, San Diego, Novembre 2016.
National Conferences
- M. Peyrounette, Y. Davit, M. Quintard, S. Lorthois, : Approche mixte pour la modélisation de l'écoulement sanguin dans la microcirculation cérébrale. 12èmes Journées d’Etude sur les Milieux Poreux, Toulouse, Octobre 2014.
- S. Lorthois, Modélisation de la microcirculation sanguine cérébrale : état de l'art et perspectives, Conférence semi-plénière, 22ème Congrès Français de Mécanique, Lyon, Aout 2015.
- M. Peyrounette, Y. Davit, M. Quintard, S.Lorthois. Vers une modélisation à grande échelle de la microcirculation cérébrale humaine : approche hybride et calcul haute performance, 13èmes Journées d’Etudes sur les Milieux Poreux, Anglet, Octobre 2016.
- V. Doyeux, Y. Davit, M. Quintard, S. Lorthois. Mass transfer simulation in 3D anatomically accurate brain microvascular networks, 13èmes Journées d’Etudes sur les Milieux Poreux, Anglet, Octobre 2016.
- M. Berg, Y. Davit, M. Quintard, S.Lorthois. Modeling momentum and mass transport in brain microvascular networks, 13èmes Journées d’Etudes sur les Milieux Poreux, Anglet, Octobre 2016.
